noresm2nc4mpi - hexagon compression tool for NorESM output
Run /work/shared/noresm/tools/noresm2nc4mpi -h
to print detailed instructions:
Usage: /work/shared/noresm/tools/noresm2nc4mpi <absolute path to case in archive directory> Example: export ACCOUNT=nn9039k export WALLTIME=24:00:00 noresm2nc4mpi /work/ingo/archive/my-noresm-case Purpose: Converts NorESM output to compressed netcdf 4 format and gzips restart files Description: noresm2nc4mpi is fully mpi parallized and submits a pbs job to the queue to do the compression on the backend. IMPORTANT: Only run one instance of noresm2nc4mpi on a single case at a time. Yet, it is safe to run multiple instances of noresm2nc4mpi on multiple NorESM cases at a time. In case that a noresm2nc4mpi job terminates before completion then simply run noresm2nc4mpi again (the tool with continue where it stopped). Influencial environmental variables (default values): ACCOUNT (nn2345k) WALLTIME (48:00:00) NTHREADS (32) # number of cpus used ZIPRES (1) # 1=gzip restart files RMLOGS (1) # 1=remove log files COMPLEVEL (5) # compression level NCCOPY (/opt/cray/netcdf/4.1.3/gnu/46/bin/nccopy) NCDUMP (/opt/cray/netcdf/4.1.3/gnu/46/bin/ncdump) GZIP (/usr/bin/gzip) TEMPDIR (/work/ingo/noresm2nc4mpi)